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rs3087243 CTLA4

Homozygous risk allele (A). Associated with: Autoimmune lymphoproliferative syndrome due to CTLA4 haploinsuffiency; Autoimmune traits pleiotropy; Basal cell carcinoma

Imported from PharmGKB:3 · not individually reviewed Drug response · dbSNP

What is rs3087243?

rs3087243 is a single-nucleotide polymorphism (SNP) in the CTLA4 gene. Each person carries two copies, one from each parent, so a result is reported as a pair of letters such as AA. The table below describes what studies associate with each genotype; the association is statistical, across populations, and is not a diagnosis.

What does each rs3087243 genotype mean?

GenotypeAssociationWhat the evidence saysConfidence
AAelevatedHomozygous risk allele (A). Associated with: Autoimmune lymphoproliferative syndrome due to CTLA4 haploinsuffiency; Autoimmune traits pleiotropy; Basal cell carcinoma65%

Which drugs have annotations for rs3087243?

PharmGKB clinical annotations (level 1A is the strongest evidence, 4 the weakest):

DrugAnnotation typeEvidence level
Tumor necrosis factor alpha (TNF-alpha) inhibitorsToxicity3

Is rs3087243 on 23andMe and AncestryDNA chips?

Chip coverage is not recorded for this variant. Orviva reports it when a raw-data file contains it directly or via a well-correlated proxy SNP, and says so when it does not.

Sources

  • PharmGKB:3
  • Drug:Tumor necrosis factor alpha (TNF-alpha) inhibitors
  • Type:Toxicity

Genetic associations describe risk across populations, not a diagnosis for any one person. Most variants shift risk modestly and act alongside lifestyle, environment and other genes. Consumer DNA chips do not read every position and can be wrong at any single one. For general education only; talk to a clinician or genetic counsellor before acting on anything here, and never change a prescribed medicine without your prescriber.